Uses of Class
fr.ifremer.isisfish.datastore.SimulationStorage

Packages that use SimulationStorage

Package	Description
fr.ifremer.isisfish.datastore	Data storage.
fr.ifremer.isisfish.export
fr.ifremer.isisfish.simulator
fr.ifremer.isisfish.simulator.launcher	Isis fish simulation launchers.
fr.ifremer.isisfish.simulator.sensitivity	Sensitivity analysis.
fr.ifremer.isisfish.ui.result	Result view.

Uses of SimulationStorage in fr.ifremer.isisfish.datastore

Fields in fr.ifremer.isisfish.datastore declared as SimulationStorage

Modifier and Type	Field	Description
protected SimulationStorage	ResultDatabaseStorage.simulation	Deprecated.
protected SimulationStorage	ResultStorageAbstract.simulation

Fields in fr.ifremer.isisfish.datastore with type parameters of type SimulationStorage

Modifier and Type	Field	Description
protected static Map<String,SimulationStorage>	SimulationStorage.simulations	Cache des simulation storage.

Methods in fr.ifremer.isisfish.datastore that return SimulationStorage

Modifier and Type	Method	Description
static SimulationStorage	SimulationStorage.create(String name, SimulationParameter parameter)	Permet de créer une nouvelle simulation si la simulation existe déjà une exception est levée.
static SimulationStorage	SimulationStorage.getSimulation(String name)	Retourne la simulation demandée.
static SimulationStorage	SimulationStorage.importAndRenameZip(File directory, File file, String newName)	Import zipped simulation in specific directory, result is not put in cache.
static SimulationStorage	SimulationStorage.importAndRenameZip(File file, String newName)	Import zipped simulation.
static SimulationStorage	SimulationStorage.importZip(File file)	Import zipped simulation.

Constructors in fr.ifremer.isisfish.datastore with parameters of type SimulationStorage

Modifier	Constructor	Description
	ResultDatabaseStorage(SimulationStorage simulation)	Deprecated. Les ResultStorage ne doivent pas etre instancier directement, mais recuperer a partir d'un getResultStorage()
	ResultMappedStorage(SimulationStorage simulation)	Deprecated. Les ResultStorage ne doivent pas etre instancier directement, mais recuperer a partir d'un getResultStorage()
	ResultStorageAbstract(SimulationStorage simulation)	Les ResultStorage ne doivent pas etre instancier directement, mais recuperer a partir d'un getResultStorage()
	ResultStorageCSV(SimulationStorage simulation)
	ResultStorageInMemory(SimulationStorage simulation)	Deprecated. Les ResultStorage ne doivent pas etre instancier directement, mais recuperer a partir d'un getResultStorage()

Uses of SimulationStorage in fr.ifremer.isisfish.export

Fields in fr.ifremer.isisfish.export declared as SimulationStorage

Modifier and Type	Field	Description
protected SimulationStorage	ExportContext.simulationStorage

Methods in fr.ifremer.isisfish.export that return SimulationStorage

Modifier and Type	Method	Description
SimulationStorage	ExportContext.getSimulationStorage()

Methods in fr.ifremer.isisfish.export with parameters of type SimulationStorage

Modifier and Type	Method	Description
static void	ExportHelper.doExport(SimulationStorage simulation, File destdir, List<Export> exports, File compileDir)	Deprecated. since 4.4.0.0, used only in one script, will not be replaced
void	Export.export(SimulationStorage simulation, Writer out)	Exporte les resultat apres la simulation.
void	ExportStep.export(SimulationStorage simulation, TimeStep step, Writer out)	Exporte les resultats, cette methode est appellee a la fin de chaque pas de temps.
void	ExportStep.exportBegin(SimulationStorage simulation, Writer out)	Appelée au début de la simulation.
void	ExportStep.exportEnd(SimulationStorage simulation, Writer out)	Appeler a la fin de la simulation.
static void	ExportHelper.exportToFile(SimulationStorage simulationStorage, ExportInfo exportInfo, File file)	Do single export.
protected static long	ExportHelper.exportToFile(SimulationStorage simulation, File destdir, Export export)	Deprecated. since 4.4.0.0, used only in one script, will not be replaced
static void	ExportHelper.exportToFile(SimulationStorage simulationStorage, String exportName, File file)	Do single export.
void	ExportContext.setSimulationStorage(SimulationStorage simulationStorage)

Uses of SimulationStorage in fr.ifremer.isisfish.simulator

Fields in fr.ifremer.isisfish.simulator declared as SimulationStorage

Modifier and Type	Field	Description
protected SimulationStorage	SimulationContext.simulation
protected SimulationStorage	SimulationControl.simulation

Fields in fr.ifremer.isisfish.simulator with type parameters of type SimulationStorage

Modifier and Type	Field	Description
protected List<List<SimulationStorage>>	OptimizationContextInternal.generations
protected List<SimulationStorage>	OptimizationContextInternal.nextSimulations	Simulation to do during next generation simulation

Methods in fr.ifremer.isisfish.simulator that return SimulationStorage

Modifier and Type	Method	Description
SimulationStorage	SimulationPlanContext.getLastSimulation()	Get last simulation storage.
SimulationStorage	SimulationPlanContextInternal.getLastSimulation()	Get last simulation storage.
SimulationStorage	SimulationControl.getSimulation()	Retourne la simulation associe a ce control
SimulationStorage	SimulationPlanContext.getSimulation(int number)	Get SimulationStorage for specified simulation plan number.
SimulationStorage	SimulationPlanContextInternal.getSimulation(int number)	Get SimulationStorage for specified simulation plan number.
SimulationStorage	SimulationContext.getSimulationStorage()
SimulationStorage	OptimizationContext.newSimulation()	Return new simulation.
SimulationStorage	OptimizationContext.newSimulation(Factor... factors)	Create simulation.
SimulationStorage	OptimizationContextInternal.newSimulation()	Return new simulation.
SimulationStorage	OptimizationContextInternal.newSimulation(Factor... factors)	Create simulation.

Methods in fr.ifremer.isisfish.simulator that return types with arguments of type SimulationStorage

Modifier and Type	Method	Description
List<SimulationStorage>	OptimizationContextInternal.clearNextSimulation()	Get simulation to do, put it generations and increment currentGeneration This method must be call be Simulator when it want to get next simulations to do.
List<SimulationStorage>	OptimizationContext.getGeneration(int n)	Return simulation for generation n
List<SimulationStorage>	OptimizationContextInternal.getGeneration(int n)
List<SimulationStorage>	OptimizationContext.getLastSimulations()	Return last generation simulations.
List<SimulationStorage>	OptimizationContextInternal.getLastSimulations()
List<SimulationStorage>	OptimizationContext.getNextSimulations()	Return next generation, in endGeneration, this method return all time empty list.
List<SimulationStorage>	OptimizationContextInternal.getNextSimulations()

Methods in fr.ifremer.isisfish.simulator with parameters of type SimulationStorage

Modifier and Type	Method	Description
protected void	OptimizationContextInternal.addSimulation(SimulationStorage s)
boolean	SimulationPlan.afterSimulation(SimulationPlanContext context, SimulationStorage lastSimulation)	Call after each simulation.
boolean	SimulationPlan.beforeSimulation(SimulationPlanContext context, SimulationStorage nextSimulation)	Call before each simulation.
double	Objective.eval(OptimizationContext context, SimulationStorage simulation, List<org.nuiton.math.matrix.MatrixND> exports, List<org.nuiton.math.matrix.MatrixND> observations)	Effectue une evaluation entre les exports et les observations.
Historic.Experience	Historic.get(SimulationStorage sim)
void	SimulationContext.setSimulationStorage(SimulationStorage simulation)

Uses of SimulationStorage in fr.ifremer.isisfish.simulator.launcher

Fields in fr.ifremer.isisfish.simulator.launcher declared as SimulationStorage

Modifier and Type	Field	Description
protected SimulationStorage	InProcessSimulatorLauncher.SimThread.simulation
protected SimulationStorage	InProcessSimulatorLauncher.simulation

Methods in fr.ifremer.isisfish.simulator.launcher that return SimulationStorage

Modifier and Type	Method	Description
SimulationStorage	InProcessSimulatorLauncher.getSimulationStorage(SimulationService simulationService, SimulationControl control)
SimulationStorage	SimulatorLauncher.getSimulationStorage(SimulationService simulationService, SimulationControl control)	Retourne le storage où est stockée la simulation.
SimulationStorage	SSHSimulatorLauncher.getSimulationStorage(SimulationService simulationService, SimulationControl control)	Retourne le storage où est stockée la simulation.
SimulationStorage	SubProcessSimulationLauncher.getSimulationStorage(SimulationService simulationService, SimulationControl control)
protected SimulationStorage	InProcessSimulatorLauncher.localSimulate(SimulationControl control, SimulationStorage simulation)	fait la simulation en local dans un nouveau thread, cela permet pour chaque simulation d'avoir les bons scripts dans le classloader et non pas d'utiliser les scripts d'une autre simulation
protected SimulationStorage	InProcessSimulatorLauncher.localSimulateSameThread(SimulationControl control, SimulationStorage simulation)	Cree le simulation context, creer le ClassLoader, met en place les AOP, met a jour des informations sur la simulation et lance la simulation en local
SimulationStorage	SubProcessSimulationLauncher.subProcessSimulate(SimulationControl control, File simulationZip, String simulationPrescript)

Methods in fr.ifremer.isisfish.simulator.launcher that return types with arguments of type SimulationStorage

Modifier and Type	Method	Description
protected List<SimulationStorage>	SimulationMonitor.getStorageListForSecondPass(String asPrefixName, int numberOfSimulation)	Parcourt les dossiers et instancie les storages une fois qu'on est sur qu'on a toutes les simulations.

Methods in fr.ifremer.isisfish.simulator.launcher with parameters of type SimulationStorage

Modifier and Type	Method	Description
protected void	SimulationMonitor.analyzeSensitivityResult(SimulationJob job, SimulationStorage simulation)	For each finished simulation, check that all sensitivity simulation are available (in case of sensitivity simulation only).
void	OptimizationPrepareJob.finished(SimulationJob job, SimulationStorage sim)
void	SimulationJob.PostAction.finished(SimulationJob job, SimulationStorage sim)	Appelé lorsque la simulation s'arrete normalement.
void	SimulationPlanPrepareJob.finished(SimulationJob job, SimulationStorage sim)
protected SimulationStorage	InProcessSimulatorLauncher.localSimulate(SimulationControl control, SimulationStorage simulation)	fait la simulation en local dans un nouveau thread, cela permet pour chaque simulation d'avoir les bons scripts dans le classloader et non pas d'utiliser les scripts d'une autre simulation
protected SimulationStorage	InProcessSimulatorLauncher.localSimulateSameThread(SimulationControl control, SimulationStorage simulation)	Cree le simulation context, creer le ClassLoader, met en place les AOP, met a jour des informations sur la simulation et lance la simulation en local

Constructors in fr.ifremer.isisfish.simulator.launcher with parameters of type SimulationStorage

Modifier	Constructor	Description
	SimThread(SimulationControl control, SimulationStorage simulation)

Uses of SimulationStorage in fr.ifremer.isisfish.simulator.sensitivity

Method parameters in fr.ifremer.isisfish.simulator.sensitivity with type arguments of type SimulationStorage

Modifier and Type	Method	Description
void	SensitivityAnalysis.analyzeResult(List<SimulationStorage> simulationStorages, File outputdirectory)	Permet de renvoyer les resultats de simulations à l'outils de d'analyse de sensibilité.
protected String	AbstractSensitivityAnalysis.createImportInstruction(SensitivityExport export, List<SimulationStorage> simulationStorages)	Cree l'instruction R qui permet de relire le contenu d'un fichier genere par un Export Isis.

Uses of SimulationStorage in fr.ifremer.isisfish.ui.result

Fields in fr.ifremer.isisfish.ui.result declared as SimulationStorage

Modifier and Type	Field	Description
protected SimulationStorage	MatrixSummaryRenderer.simulationStorage
protected SimulationStorage	ResultFrameHandler.simulationStorage

Methods in fr.ifremer.isisfish.ui.result with parameters of type SimulationStorage

Modifier and Type	Method	Description
void	ResultFrameHandler.afterInit(SimulationStorage simulation)	Initialise la vue avec les liste des simulations disponible.

Constructors in fr.ifremer.isisfish.ui.result with parameters of type SimulationStorage

Modifier	Constructor	Description
	MatrixSummaryRenderer(SimulationStorage simulationStorage, ResultStorage resultStorage, org.nuiton.topia.TopiaContext topiaContext)