Package fr.ifremer.isisfish.entities

Interface Population

All Superinterfaces:
Serializable, org.nuiton.topia.persistence.TopiaEntity, org.nuiton.topia.persistence.TopiaEntityContextable
All Known Implementing Classes:
PopulationAbstract, PopulationImpl
public interface Population extends org.nuiton.topia.persistence.TopiaEntityContextable

  • Field Details

  • Method Details

    • setName

      void setName(String name)

    • getName

      String getName()

    • setGeographicId

      void setGeographicId(String geographicId)

    • getGeographicId

      String getGeographicId()

    • setPlusGroup

      void setPlusGroup(boolean plusGroup)

    • isPlusGroup

      boolean isPlusGroup()

    • getPlusGroup

      boolean getPlusGroup()

    • setGrowth

      void setGrowth(Equation growth)

    • getGrowth

      Equation getGrowth()

    • setGrowthReverse

      void setGrowthReverse(Equation growthReverse)

    • getGrowthReverse

      Equation getGrowthReverse()

    • setComment

      void setComment(String comment)

    • getComment

      String getComment()

    • setMeanWeight

      void setMeanWeight(Equation meanWeight)

    • getMeanWeight

      Equation getMeanWeight()

    • setPrice

      void setPrice(Equation price)

    • getPrice

      Equation getPrice()

    • setNaturalDeathRate

      void setNaturalDeathRate(Equation naturalDeathRate)

    • getNaturalDeathRate

      Equation getNaturalDeathRate()

    • setFishingMortalityOtherFleets

      void setFishingMortalityOtherFleets(Equation fishingMortalityOtherFleets)

    • getFishingMortalityOtherFleets

      Equation getFishingMortalityOtherFleets()

    • setCaractBioComment

      void setCaractBioComment(String caractBioComment)

    • getCaractBioComment

      String getCaractBioComment()

    • setReproductionEquation

      void setReproductionEquation(Equation reproductionEquation)

    • getReproductionEquation

      Equation getReproductionEquation()

    • setMonthGapBetweenReproRecrutement

      void setMonthGapBetweenReproRecrutement(int monthGapBetweenReproRecrutement)

    • getMonthGapBetweenReproRecrutement

      int getMonthGapBetweenReproRecrutement()

    • setRecruitmentDistribution

      void setRecruitmentDistribution(org.nuiton.math.matrix.MatrixND recruitmentDistribution)

    • getRecruitmentDistribution

      org.nuiton.math.matrix.MatrixND getRecruitmentDistribution()

    • setRecruitmentEquation

      void setRecruitmentEquation(Equation recruitmentEquation)

    • getRecruitmentEquation

      Equation getRecruitmentEquation()

    • setRecruitmentComment

      void setRecruitmentComment(String recruitmentComment)

    • getRecruitmentComment

      String getRecruitmentComment()

    • setZonesComment

      void setZonesComment(String zonesComment)

    • getZonesComment

      String getZonesComment()

    • setSeasonsComment

      void setSeasonsComment(String seasonsComment)

    • getSeasonsComment

      String getSeasonsComment()

    • setCapturabilityComment

      void setCapturabilityComment(String capturabilityComment)

    • getCapturabilityComment

      String getCapturabilityComment()

    • setMigrationComment

      void setMigrationComment(String migrationComment)

    • getMigrationComment

      String getMigrationComment()

    • setMappingZoneReproZoneRecru

      void setMappingZoneReproZoneRecru(org.nuiton.math.matrix.MatrixND mappingZoneReproZoneRecru)

    • getMappingZoneReproZoneRecru

      org.nuiton.math.matrix.MatrixND getMappingZoneReproZoneRecru()

    • setCapturability

      void setCapturability(org.nuiton.math.matrix.MatrixND capturability)

    • getCapturability

      org.nuiton.math.matrix.MatrixND getCapturability()

    • setCapturabilityEquationUsed

      void setCapturabilityEquationUsed(boolean capturabilityEquationUsed)

    • isCapturabilityEquationUsed

      boolean isCapturabilityEquationUsed()

    • getCapturabilityEquationUsed

      boolean getCapturabilityEquationUsed()

    • setCapturabilityEquation

      void setCapturabilityEquation(Equation capturabilityEquation)

    • getCapturabilityEquation

      Equation getCapturabilityEquation()

    • setMaturityOgiveEquation

      void setMaturityOgiveEquation(Equation maturityOgiveEquation)

    • getMaturityOgiveEquation

      Equation getMaturityOgiveEquation()

    • setReproductionRateEquation

      void setReproductionRateEquation(Equation reproductionRateEquation)

    • getReproductionRateEquation

      Equation getReproductionRateEquation()

    • setFbarGroupMin

      void setFbarGroupMin(int fbarGroupMin)

    • getFbarGroupMin

      int getFbarGroupMin()

    • setFbarGroupMax

      void setFbarGroupMax(int fbarGroupMax)

    • getFbarGroupMax

      int getFbarGroupMax()

    • setAbundanceReferenceMonth

      void setAbundanceReferenceMonth(Month abundanceReferenceMonth)

    • getAbundanceReferenceMonth

      Month getAbundanceReferenceMonth()

    • setComputeFOnLandings

      void setComputeFOnLandings(boolean computeFOnLandings)

    • isComputeFOnLandings

      boolean isComputeFOnLandings()

    • getComputeFOnLandings

      boolean getComputeFOnLandings()

    • addPopulationGroup

      void addPopulationGroup(PopulationGroup populationGroup)

    • addAllPopulationGroup

      void addAllPopulationGroup(List<PopulationGroup> populationGroup)

    • setPopulationGroup

      void setPopulationGroup(List<PopulationGroup> populationGroup)

    • removePopulationGroup

      void removePopulationGroup(PopulationGroup populationGroup)

    • clearPopulationGroup

      void clearPopulationGroup()

    • getPopulationGroup

      List<PopulationGroup> getPopulationGroup()

    • getPopulationGroupByTopiaId

      PopulationGroup getPopulationGroupByTopiaId(String topiaId)

    • sizePopulationGroup

      int sizePopulationGroup()

    • isPopulationGroupEmpty

      boolean isPopulationGroupEmpty()

    • addPopulationSeasonInfo

      void addPopulationSeasonInfo(PopulationSeasonInfo populationSeasonInfo)

    • addAllPopulationSeasonInfo

      void addAllPopulationSeasonInfo(List<PopulationSeasonInfo> populationSeasonInfo)

    • setPopulationSeasonInfo

      void setPopulationSeasonInfo(List<PopulationSeasonInfo> populationSeasonInfo)

    • removePopulationSeasonInfo

      void removePopulationSeasonInfo(PopulationSeasonInfo populationSeasonInfo)

    • clearPopulationSeasonInfo

      void clearPopulationSeasonInfo()

    • getPopulationSeasonInfo

      List<PopulationSeasonInfo> getPopulationSeasonInfo()

    • getPopulationSeasonInfoByTopiaId

      PopulationSeasonInfo getPopulationSeasonInfoByTopiaId(String topiaId)

    • sizePopulationSeasonInfo

      int sizePopulationSeasonInfo()

    • isPopulationSeasonInfoEmpty

      boolean isPopulationSeasonInfoEmpty()

    • setSpecies

      void setSpecies(Species species)

    • getSpecies

      Species getSpecies()

    • addReproductionZone

      void addReproductionZone(Zone reproductionZone)

    • addAllReproductionZone

      void addAllReproductionZone(List<Zone> reproductionZone)

    • setReproductionZone

      void setReproductionZone(List<Zone> reproductionZone)

    • removeReproductionZone

      void removeReproductionZone(Zone reproductionZone)

    • clearReproductionZone

      void clearReproductionZone()

    • getReproductionZone

      List<Zone> getReproductionZone()

    • getReproductionZoneByTopiaId

      Zone getReproductionZoneByTopiaId(String topiaId)

    • sizeReproductionZone

      int sizeReproductionZone()

    • isReproductionZoneEmpty

      boolean isReproductionZoneEmpty()

    • addPopulationZone

      void addPopulationZone(Zone populationZone)

    • addAllPopulationZone

      void addAllPopulationZone(List<Zone> populationZone)

    • setPopulationZone

      void setPopulationZone(List<Zone> populationZone)

    • removePopulationZone

      void removePopulationZone(Zone populationZone)

    • clearPopulationZone

      void clearPopulationZone()

    • getPopulationZone

      List<Zone> getPopulationZone()

    • getPopulationZoneByTopiaId

      Zone getPopulationZoneByTopiaId(String topiaId)

    • sizePopulationZone

      int sizePopulationZone()

    • isPopulationZoneEmpty

      boolean isPopulationZoneEmpty()

    • addRecruitmentZone

      void addRecruitmentZone(Zone recruitmentZone)

    • addAllRecruitmentZone

      void addAllRecruitmentZone(List<Zone> recruitmentZone)

    • setRecruitmentZone

      void setRecruitmentZone(List<Zone> recruitmentZone)

    • removeRecruitmentZone

      void removeRecruitmentZone(Zone recruitmentZone)

    • clearRecruitmentZone

      void clearRecruitmentZone()

    • getRecruitmentZone

      List<Zone> getRecruitmentZone()

    • getRecruitmentZoneByTopiaId

      Zone getRecruitmentZoneByTopiaId(String topiaId)

    • sizeRecruitmentZone

      int sizeRecruitmentZone()

    • isRecruitmentZoneEmpty

      boolean isRecruitmentZoneEmpty()

    • getPopulationSeasonInfo

      PopulationSeasonInfo getPopulationSeasonInfo(Month month)

    • N2DToN1D

      org.nuiton.math.matrix.MatrixND N2DToN1D(org.nuiton.math.matrix.MatrixND m)

    • split2D

      org.nuiton.math.matrix.MatrixND split2D(org.nuiton.math.matrix.MatrixND m)

    • getNaturalDeathBirth

      double getNaturalDeathBirth(Zone zone)

    • getAge

      double getAge(double length, PopulationGroup group)

    • getLength

      double getLength(double age, PopulationGroup group)

    • getNaturalDeathRateMatrix

      org.nuiton.math.matrix.MatrixND getNaturalDeathRateMatrix()

    • getRecruitmentMatrix

      org.nuiton.math.matrix.MatrixND getRecruitmentMatrix(TimeStep step, Population pop, RecruitmentInputMap recruitmentInputs, org.nuiton.math.matrix.MatrixND result)

    • getFishingMortalityOtherFleetsMatrix

      org.nuiton.math.matrix.MatrixND getFishingMortalityOtherFleetsMatrix()